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On this page
  • Select 'Analysis'
  • Select 'Run Analysis'
  • Run Analysis
  1. Protocols
  2. Shotgun Microbiome

Analyze Datasets

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Last updated 1 year ago

Now you should have a dataset with described profiles. Let’s explore this using bioinformatic analyses.

Select 'Analysis'

Select the ‘Analysis’ tab

Your Analyses page will display any previously analysed datasets. These can be sorted, deleted, filtered, and rearranged, according to your needs.

Select 'Run Analysis'

Select the ‘Run Analysis’ button, to initiate a new analysis.

Run Analysis

From here, there are a plethora of analyses you can choose from. Linked in the table below are our current services, more will be added soon.

Engine Name

Engine Category

Exploratory Data Analysis

Composition

Composition

Composition

Alpha Diversity

Beta Diversity

Differential Abundance Test

Enterotyping

Cooccurrence

Cooccurrence

Exploratory Data Analysis

Differential Abundance Test

Exploratory Data Analysis

Exploratory Data Analysis

⚗️
Quality Check
Pie Chart Composition
Summary Statistics
Group composition
Alpha Diversity
Beta Diversity
Differential Abundance
Enterotype
Cooccurrence
Cooccurrence Spearman
Statistical Matching
LEfSe
Metadata EDA
Profile EDA