> For the complete documentation index, see [llms.txt](https://kb.ezbiocloud.net/home/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://kb.ezbiocloud.net/home/protocols/clinical-metagenomics.md).

# Clinical Metagenomics

This walkthrough will guide you in using GermAI Clinical Metagenomics.

You can assess putative pathogenic agents (bacteria, fungi, viruses) and their associated virulence factors and antibiotic resistance by simply uploading metagenomic files. 

A comprehensive report will be generated for each sample you upload.

Now let’s get started.

***

## Coming Soon


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# Agent Instructions
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